PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000491271
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 245aa    MW: 27323.9 Da    PI: 10.3638
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000491271genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.65.9e-1046106344
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC......................TTS-STCHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkas...................kapskKlsKaeiL 44 
                    ++h+e E+rRR riNs + +Lr +lP +                       s+Kls   iL
  MDP0000491271  46 KKHSESEKRRRMRINSQYTTLRAILPDLIkvyylidlmefclnvygvlXKMSRKLSSLRIL 106
                    68*************************9989999999999999999996666666666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-93575IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-436106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.57343126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-746108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.35E-446130No hitNo description
SMARTSM003531.4E-549132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-9107135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-9108135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550219.27E-5170231No hitNo description
Gene3DG3DSA:3.30.70.2601.2E-5171215No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MQSTQSYYPK QISFPKGQRV LLTNNIYNKN FFKPKSKAEA KVIAAKKHSE SEKRRRMRIN  60
SQYTTLRAIL PDLIKVYYLI DLMEFCLNVY GVLXKMSRKL SSLRILDIQM DKASVLGETV  120
RKVRELKKAL TEVEAACHCG DRRDECVLPG GVDKLSVEQC EGEKGGLVKA TFSCEDRLGL  180
ISDMTRALSC VKGRVVRAEM VTVGGRSKNA LWVQGLGGGN EGVVALKRAL KVVIDRPVLP  240
RNII*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008373852.11e-146PREDICTED: transcription factor bHLH131-like
TrEMBLM5WLM71e-105M5WLM7_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.13e-37bHLH family protein